neuralib.registration.coordinates.get_cellular_coordinate
- neuralib.registration.coordinates.get_cellular_coordinate(neuron_idx, ap, ml, *, unit='mm', plane_index=None)[source]
Get cellular coordinates container for doing brain mapping / topographical analysis
- Parameters:
neuron_idx (ndarray) – neuron index. Array[float, N]
ap (ndarray) – anterior posterior coordinates. Array[float, N]
ml (ndarray) – medial lateral coordinates. Array[float, N]
unit (Literal['mm', 'um']) – unit of the ap/ml value. default in mm
plane_index (ndarray | None) – neuron’s corresponding image plane. Array[float, N]. If None then full_zero
- Returns:
- Return type: