neuralib.atlas.util

SourceCoordinates

SourceCoordinates(source, coordinates)

iter_source_coordinates

Load allen ccf roi output (merged different color channels).

get_margin_merge_level

Get the lowest or highest merge level (i.e., parsed_csv) containing all the regions

allen_to_brainrender_coord

Convert coordinates space of AllenCCF to Brainrender coordinates

as_coords_array

Convert dataframe/1D numpy array to coordinates numpy array

Data

neuralib.atlas.util.ALLEN_CCF_10um_BREGMA