neuralib.widefield.transform.RegistrationApp

class neuralib.widefield.transform.RegistrationApp

Bases: QMainWindow

__init__()

Methods

__init__()
acceptDrops(self)
accessibleDescription(self)
accessibleIdentifier(self)
accessibleName(self)
actionEvent(self, a0)
actions(self)
activateWindow(self)
addAction(...)
addActions(self, actions)
addDockWidget()
addToolBar()
addToolBarBreak(self[, area])
adjustSize(self)
apply_transform()
autoFillBackground(self)
backgroundRole(self)
baseSize(self)
blockSignals(self, b)
centralWidget(self)
changeEvent(self, a0)
childAt(-> QWidget|None  -> QWidget|None)
childEvent(self, a0)
children(self)
childrenRect(self)
childrenRegion(self)
clearFocus(self)
clearMask(self)
clear_all_points()
close(self)
closeEvent(self, a0)
colorCount(self)
connectNotify(self, signal)
contentsMargins(self)
contentsRect(self)
contextMenuEvent(self, event)
contextMenuPolicy(self)
convert_to_boundary()	Convert current dorsal map to boundary using skimage boundary detection
corner(self, corner)
create(self[, window, initializeWindow, ...])
createPopupMenu(self)
createWindowContainer(window[, parent, flags])
cursor(self)
customEvent(self, a0)
deleteLater(self)
depth(self)
destroy(self[, destroyWindow, destroySubWindows])
devType(self)
devicePixelRatio(self)
devicePixelRatioF(self)
devicePixelRatioFScale()
disconnect(-> bool)
disconnectNotify(self, signal)
dockOptions(self)
dockWidgetArea(self, dockwidget)
documentMode(self)
dragEnterEvent(self, a0)
dragLeaveEvent(self, a0)
dragMoveEvent(self, a0)
dropEvent(self, a0)
dumpObjectInfo(self)
dumpObjectTree(self)
dynamicPropertyNames(self)
effectiveWinId(self)
ensurePolished(self)
enterEvent(self, event)
event(self, event)
eventFilter(self, a0, a1)
find(a0)
findChild(-> QObjectT)
findChildren(...)
focusInEvent(self, a0)
focusNextChild(self)
focusNextPrevChild(self, next)
focusOutEvent(self, a0)
focusPolicy(self)
focusPreviousChild(self)
focusProxy(self)
focusWidget(self)
font(self)
fontInfo(self)
fontMetrics(self)
foregroundRole(self)
frameGeometry(self)
frameSize(self)
geometry(self)
grab(self[, rectangle])
grabGesture(self, type[, flags])
grabKeyboard(self)
grabMouse()
grabShortcut(self, key[, context])
graphicsEffect(self)
graphicsProxyWidget(self)
hasFocus(self)
hasHeightForWidth(self)
hasMouseTracking(self)
hasTabletTracking(self)
height(self)
heightForWidth(self, a0)
heightMM(self)
hide(self)
hideEvent(self, a0)
iconSize(self)
inherits(self, classname)
initPainter(self, painter)
inputMethodEvent(self, a0)
inputMethodHints(self)
inputMethodQuery(self, a0)
insertAction(self, before, action)
insertActions(self, before, actions)
insertToolBar(self, before, toolbar)
insertToolBarBreak(self, before)
installEventFilter(self, a0)
isActiveWindow(self)
isAncestorOf(self, child)
isAnimated(self)
isDockNestingEnabled(self)
isEnabled(self)
isEnabledTo(self, a0)
isFullScreen(self)
isHidden(self)
isLeftToRight(self)
isMaximized(self)
isMinimized(self)
isModal(self)
isQmlExposed(self)
isQuickItemType(self)
isRightToLeft(self)
isSeparator(self, pos)
isSignalConnected(self, signal)
isVisible(self)
isVisibleTo(self, a0)
isWidgetType(self)
isWindow(self)
isWindowModified(self)
isWindowType(self)
keyPressEvent(self, a0)
keyReleaseEvent(self, a0)
keyboardGrabber()
killTimer(self, id)
layout(self)
layoutDirection(self)
leaveEvent(self, a0)
load_dorsal_map()
load_widefield()
locale(self)
log(message[, level])
logicalDpiX(self)
logicalDpiY(self)
lower(self)
mapFrom(-> QPoint)
mapFromGlobal(-> QPoint)
mapFromParent(-> QPoint)
mapTo(-> QPoint)
mapToGlobal(-> QPoint)
mapToParent(-> QPoint)
mask(self)
maximumHeight(self)
maximumSize(self)
maximumWidth(self)
menuBar(self)
menuWidget(self)
metaObject(self)
metric(self, a0)
minimumHeight(self)
minimumSize(self)
minimumSizeHint(self)
minimumWidth(self)
mouseDoubleClickEvent(self, a0)
mouseGrabber()
mouseMoveEvent(self, a0)
mousePressEvent(self, a0)
mouseReleaseEvent(self, a0)
move()
moveEvent(self, a0)
moveToThread(self, thread)
nativeEvent(self, eventType, message)
nativeParentWidget(self)
nextInFocusChain(self)
next_frame()
normalGeometry(self)
objectName(self)
on_hemisphere_changed()	Handle hemisphere checkbox changes and update dorsal view
on_point_clicked(image_name, point)
overrideWindowFlags(self, type)
overrideWindowState(self, state)
paintEngine(self)
paintEvent(self, a0)
paintingActive(self)
palette(self)
parent(self)
parentWidget(self)
pause_video()
physicalDpiX(self)
physicalDpiY(self)
play_video()
pos(self)
previousInFocusChain(self)
property(self, name)
pyqtConfigure(...)	Each keyword argument is either the name of a Qt property or a Qt signal.
raise_(self)
receivers(self, signal)
rect(self)
releaseKeyboard(self)
releaseMouse(self)
releaseShortcut(self, id)
removeAction(self, action)
removeDockWidget(self, dockwidget)
removeEventFilter(self, a0)
removeToolBar(self, toolbar)
removeToolBarBreak(self, before)
render(, sourceRegion, flags, sourceRegion, ...)
repaint()
resize()
resizeDocks(self, docks, sizes, orientation)
resizeEvent(self, a0)
resize_both_images()
restoreDockWidget(self, dockwidget)
restoreGeometry(self, geometry)
restoreState(self, state[, version])
safe_call(func)
saveGeometry(self)
saveState(self[, version])
save_dorsal_image()
save_transform()	save transform matrix
screen(self)
scroll()
sender(self)
senderSignalIndex(self)
setAcceptDrops(self, on)
setAccessibleDescription(self, description)
setAccessibleIdentifier(self, identifier)
setAccessibleName(self, name)
setAnimated(self, enabled)
setAttribute(self, attribute[, on])
setAutoFillBackground(self, enabled)
setBackgroundRole(self, a0)
setBaseSize()
setCentralWidget(self, widget)
setContentsMargins()
setContextMenuPolicy(self, policy)
setCorner(self, corner, area)
setCursor(self, a0)
setDisabled(self, a0)
setDockNestingEnabled(self, enabled)
setDockOptions(self, options)
setDocumentMode(self, enabled)
setEnabled(self, a0)
setFixedHeight(self, h)
setFixedSize()
setFixedWidth(self, w)
setFocus()
setFocusPolicy(self, policy)
setFocusProxy(self, a0)
setFont(self, a0)
setForegroundRole(self, a0)
setGeometry()
setGraphicsEffect(self, effect)
setHidden(self, hidden)
setIconSize(self, iconSize)
setInputMethodHints(self, hints)
setLayout(self, a0)
setLayoutDirection(self, direction)
setLocale(self, locale)
setMask()
setMaximumHeight(self, maxh)
setMaximumSize()
setMaximumWidth(self, maxw)
setMenuBar(self, menubar)
setMenuWidget(self, menubar)
setMinimumHeight(self, minh)
setMinimumSize()
setMinimumWidth(self, minw)
setMouseTracking(self, enable)
setObjectName(self, name)
setPalette(self, a0)
setParent()
setProperty(self, name, value)
setScreen(self, a0)
setShortcutAutoRepeat(self, id[, enabled])
setShortcutEnabled(self, id[, enabled])
setSizeIncrement()
setSizePolicy()
setStatusBar(self, statusbar)
setStatusTip(self, a0)
setStyle(self, a0)
setStyleSheet(self, styleSheet)
setTabOrder(a0, a1)
setTabPosition(self, areas, tabPosition)
setTabShape(self, tabShape)
setTabletTracking(self, enable)
setToolButtonStyle(self, toolButtonStyle)
setToolTip(self, a0)
setToolTipDuration(self, msec)
setUnifiedTitleAndToolBarOnMac(self, set)
setUpdatesEnabled(self, enable)
setVisible(self, visible)
setWhatsThis(self, a0)
setWindowFilePath(self, filePath)
setWindowFlag(self, a0[, on])
setWindowFlags(self, type)
setWindowIcon(self, icon)
setWindowIconText(self, a0)
setWindowModality(self, windowModality)
setWindowModified(self, a0)
setWindowOpacity(self, level)
setWindowRole(self, a0)
setWindowState(self, state)
setWindowTitle(self, a0)
sharedPainter(self)
show(self)
showEvent(self, a0)
showFullScreen(self)
showMaximized(self)
showMinimized(self)
showNormal(self)
signalsBlocked(self)
size(self)
sizeHint(self)
sizeIncrement(self)
sizePolicy(self)
splitDockWidget(self, after, dockwidget, ...)
stackUnder(self, a0)
startTimer(self, interval[, timerType])
start_live_transform_plot()	Start a live matplotlib plot showing transformed video overlaid on dorsal map
statusBar(self)
statusTip(self)
stop_live_transform_plot()	Stop the live transform plot and restore original frame methods
style(self)
styleSheet(self)
tabPosition(self, area)
tabShape(self)
tabifiedDockWidgets(self, dockwidget)
tabifyDockWidget(self, first, second)
tabletEvent(self, a0)
takeCentralWidget(self)
testAttribute(self, attribute)
thread(self)
timerEvent(self, a0)
toolBarArea(self, toolbar)
toolBarBreak(self, toolbar)
toolButtonStyle(self)
toolTip(self)
toolTipDuration(self)
tr(sourceText[, disambiguation, n])
underMouse(self)
undo_last_pair()
ungrabGesture(self, type)
unifiedTitleAndToolBarOnMac(self)
unsetCursor(self)
unsetLayoutDirection(self)
unsetLocale(self)
update()
updateGeometry(self)
updateMicroFocus(self[, query])
update_dorsal_from_region([crop])
update_live_overlay()	Update the live matplotlib overlay with current transformed frame
update_ransac_threshold()
updatesEnabled(self)
visibleRegion(self)
whatsThis(self)
wheelEvent(self, a0)
width(self)
widthMM(self)
winId(self)
window(self)
windowFilePath(self)
windowFlags(self)
windowHandle(self)
windowIcon(self)
windowIconText(self)
windowModality(self)
windowOpacity(self)
windowRole(self)
windowState(self)
windowTitle(self)
windowType(self)
x(self)
y(self)
zoom_to_fit_views()

Attributes

customContextMenuRequested	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
destroyed	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
iconSizeChanged	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
objectNameChanged	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
staticMetaObject
tabifiedDockWidgetActivated	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
toolButtonStyleChanged	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
windowIconChanged	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
windowIconTextChanged	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL
windowTitleChanged	pyqtSignal(*types, name: str = ..., revision: int = ..., arguments: Sequence = ...) -> PYQT_SIGNAL

__init__()

log(message, level='info')

Parameters:

level (Literal['info', 'warn', 'error', 'success', 'debug'])

safe_call(func)

zoom_to_fit_views()

next_frame()

play_video()

pause_video()

load_widefield()

load_dorsal_map()

update_dorsal_from_region(crop=False)

Parameters:

crop (bool)

resize_both_images()

on_hemisphere_changed()

Handle hemisphere checkbox changes and update dorsal view

convert_to_boundary()

Convert current dorsal map to boundary using skimage boundary detection

on_point_clicked(image_name, point)

update_ransac_threshold()

clear_all_points()

undo_last_pair()

apply_transform()

save_transform()

save transform matrix

save_dorsal_image()

start_live_transform_plot()

Start a live matplotlib plot showing transformed video overlaid on dorsal map

update_live_overlay()

Update the live matplotlib overlay with current transformed frame

stop_live_transform_plot()

Stop the live transform plot and restore original frame methods